About

NCCD is a method and package tool designed to compute the NCCD (Normalized Conditional Compression Distance) and, for instance, to perform phylogenomics (whole genome) on 48 bird species. It will use a state-of-the-art genomic compressor, based on a mixture of finite-context models, as a metric distance.

Citation

D. Pratas, A. J. Pinho. “A conditional compression distance that unveils insights of the genomic evolution.” arXiv preprint arXiv:1401.4134 (2014).

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