José Luis Oliveira
Universidade de Aveiro, DETI / IEETA
3810-193 Aveiro, Portugal
(+351) 234 370 500
NCCD is a method and package tool designed to compute the NCCD (Normalized Conditional Compression Distance) and, for instance, to perform phylogenomics (whole genome) on 48 bird species. It will use a state-of-the-art genomic compressor, based on a mixture of finite-context models, as a metric distance.
D. Pratas, A. J. Pinho. “A conditional compression distance that unveils insights of the genomic evolution.” arXiv preprint arXiv:1401.4134 (2014).