What is GTO ?


GTO is a framework for DNA sequences analysis and manipulation.

It answers the following questions:


Install

Get GTO and make the project, using:

git clone https://github.com/bioinformatics-ua/gto.git
cd GTO/src/
make


Note, an already compiled version of GTO is available for 64 bit Linux OS in the bin/ directory.


GTO Programs

The GTO provides pipe support for easy integration with the majority of the tools. These include programs to shuffle, transform, simulate, compress, vizualize, among others. The GTO includes the following tools, divided by genomic data format type.



1. FASTQ tools


2. FASTA tools


3. Genomic sequence tools

4. Amino acid sequence tools


5. General purpose tools


Contribute

You can contribute to this project here .


Core team