Taxonomic IdShort NameName
329726 amrAcaryochloris marina MBIC11017
441768 aclAcholeplasma laidlawii PG-8A
349163 acrAcidiphilium cryptum JF-5
204669 abaAcidobacteria bacterium Ellin345
351607 aceAcidothermus cellulolyticus 11B
397945 aavAcidovorax avenae subsp. citrulli AAC00-1
232721 ajsAcidovorax sp. JS42
405416 abcAcinetobacter baumannii ACICU
400667 acbAcinetobacter baumannii ATCC 17978
509173 abyAcinetobacter baumannii AYE
509170 abmAcinetobacter baumannii SDF
62977 aciAcinetobacter sp. ADP1
416269 aplActinobacillus pleuropneumoniae L20 (serotype 5b)
434271 apjActinobacillus pleuropneumoniae serovar 3 JL03
339671 asuActinobacillus succinogenes 130Z
7159 daagAedes aegypti (yellow fever mosquito) draft genome
380703 ahaAeromonas hydrophila subsp. hydrophila ATCC 7966
382245 asaAeromonas salmonicida subsp. salmonicida A449
272557 apeAeropyrum pernix K1
176299 atcAgrobacterium tumefaciens C58
393595 aboAlcanivorax borkumensis SK2
187272 aehAlkalilimnicola ehrlichei MLHE-1
293826 amtAlkaliphilus metalliredigens QYMF
350688 aoeAlkaliphilus oremlandii OhILAs
4679 eacpAllium cepa (onion) (EST)
103690 anaAnabaena sp. PCC 7120 (Nostoc sp. PCC 7120)
240292 avaAnabaena variabilis ATCC 29413
290397 adeAnaeromyxobacter dehalogenans 2CP-C
404589 afwAnaeromyxobacter sp. Fw109-5
234826 amaAnaplasma marginale St. Maries
212042 aphAnaplasma phagocytophilum HZ
180454 agaAnopheles gambiae PEST (African malaria mosquito)
7460 dameApis mellifera (honey bee) draft genome
224324 aaeAquifex aeolicus VF5
3702 athArabidopsis thaliana
224325 afuArchaeoglobus fulgidus DSM 4304 (VC-16)
367737 abuArcobacter butzleri RM4018
290340 aauArthrobacter aurescens TC1
290399 artArthrobacter sp. FB24
284811 agoAshbya gossypii (Eremothecium gossypii) ATCC 10895
330879 afmAspergillus fumigatus Af293
227321 aniAspergillus nidulans FGSC A4
425011 angAspergillus niger CBS 513.88
510516 aorAspergillus oryzae RIB40
322098 aywAster yellows witches'-broom phytoplasma AYWB
62928 azoAzoarcus sp. BH72
76114 ebaAzoarcus sp. EbN1
438753 azcAzorhizobium caulinodans ORS 571
326423 bayBacillus amyloliquefaciens FZB42
191218 baaBacillus anthracis A2012
198094 banBacillus anthracis Ames
261594 barBacillus anthracis Ames 0581 (Ames Ancestor)
260799 batBacillus anthracis Sterne
222523 bcaBacillus cereus ATCC 10987
226900 bceBacillus cereus ATCC 14579
288681 bczBacillus cereus E33L (zebra killer)
315749 bcyBacillus cereus subsp. cytotoxis NVH 391-98
66692 bclBacillus clausii KSM-K16
272558 bhaBacillus halodurans C-125
279010 bliBacillus licheniformis ATCC 14580
315750 bpuBacillus pumilus SAFR-032
224308 bsuBacillus subtilis 168
281309 btkBacillus thuringiensis 97-27 (serovar konkukian)
412694 btlBacillus thuringiensis Al Hakam
315730 bweBacillus weihenstephanensis KBAB4
272559 bfsBacteroides fragilis NCTC 9343
295405 bfrBacteroides fragilis YCH46
226186 bthBacteroides thetaiotaomicron VPI-5482
435590 bvuBacteroides vulgatus ATCC 8482
360095 bbkBartonella bacilliformis KC583
283166 bheBartonella henselae Houston-1
283165 bquBartonella quintana Toulouse
382640 btrBartonella tribocorum CIP 105476
374463 bciBaumannia cicadellinicola Hc symbioint of Homalodisca coagulata
264462 bbaBdellovibrio bacteriovorus HD100
395963 bidBeijerinckia indica subsp. indica ATCC 9039
161934 ebvlBeta vulgaris (beet) (EST)
367928 badBifidobacterium adolescentis ATCC 15703
205913 bljBifidobacterium longum DJO10A
206672 bloBifidobacterium longum NCC2705
203907 bflBlochmannia floridanus endosymbiont of Camponotus floridanus
7091 dbmoBombyx mori (domestic silkworm) draft genome
360910 bavBordetella avium 197N
257310 bbrBordetella bronchiseptica RB50
257311 bpaBordetella parapertussis 12822
257313 bpeBordetella pertussis Tohama I
340100 bptBordetella petrii DSM 12804
390236 bafBorrelia afzelii PKo
224326 bbuBorrelia burgdorferi B31
290434 bgaBorrelia garinii PBi
9913 btaBos taurus (cow)
224911 bjaBradyrhizobium japonicum USDA110
288000 bbtBradyrhizobium sp. BTAi1
114615 braBradyrhizobium sp. ORS278
138011 ebnaBrassica napus (rape) EST contigs EST contigs
262698 bmbBrucella abortus 9-941 (biovar 1)
430066 bmcBrucella abortus S19
483179 bcsBrucella canis ATCC 23365
224914 bmeBrucella melitensis 16M
359391 bmfBrucella melitensis biovar Abortus 2308
444178 bovBrucella ovis ATCC 25840
204722 bmsBrucella suis 1330
470137 bmtBrucella suis ATCC 23445
6279 dbmyBrugia malayi (filaria)
107806 bucBuchnera aphidicola APS endosymbiont of Acyrthosiphon pisum (pea
224915 babBuchnera aphidicola Bp endosymbiont of Baizongia pistaciae
372461 bccBuchnera aphidicola Cc endosymbiont of Cinara cedri
198804 basBuchnera aphidicola Sg endosymbiont of Schizaphis graminum
398577 bacBurkholderia ambifaria MC40-6
331271 bcnBurkholderia cenocepacia AU 1054
331272 bchBurkholderia cenocepacia HI2424
406425 bcmBurkholderia cenocepacia MC0-3
339670 bamBurkholderia cepacia AMMD
243160 bmaBurkholderia mallei ATCC 23344
412022 bmlBurkholderia mallei NCTC 10229
320389 bmnBurkholderia mallei NCTC 10247
320388 bmvBurkholderia mallei SAVP1
395019 bmuBurkholderia multivorans ATCC 17616
391038 bphBurkholderia phymatum STM815
357348 bplBurkholderia pseudomallei 1106a
320372 bpmBurkholderia pseudomallei 1710b
320373 bpdBurkholderia pseudomallei 668
272560 bpsBurkholderia pseudomallei K96243
269483 burBurkholderia sp. 383
271848 bteBurkholderia thailandensis E264
269482 bviBurkholderia vietnamiensis G4
266265 bxeBurkholderia xenovorans LB400
6238 dcbrCaenorhabditis briggsae draft genome
6239 celCaenorhabditis elegans (nematode)
351627 cscCaldicellulosiruptor saccharolyticus DSM 8903
397948 cmaCaldivirga maquilingensis IC-167
360104 ccoCampylobacter concisus 13826
360105 ccvCampylobacter curvus 525.92
360106 cffCampylobacter fetus subsp. fetus 82-40
360107 chaCampylobacter hominis ATCC BAA-381
195099 cjrCampylobacter jejuni RM1221
360109 cjdCampylobacter jejuni subsp. doylei 269.97
407148 cjuCampylobacter jejuni subsp. jejuni 81116
354242 cjjCampylobacter jejuni subsp. jejuni 81-176
192222 cjeCampylobacter jejuni subsp. jejuni NCTC 11168
5476 calCandida albicans
284593 cgrCandida glabrata CBS138
291272 bpnCandidatus Blochmannia pennsylvanicus BPEN endosymbiont of
387662 crpCandidatus Carsonella ruddii PV endosymbiont of Pachypsylla
96561 dolCandidatus Desulfococcus oleovorans Hxd3
477974 dauCandidatus Desulforudis audaxviator MP104C
374847 kcrCandidatus Korarchaeum cryptofilum OPF8
456442 mbnCandidatus Methanoregula boonei 6A8
335992 pubCandidatus Pelagibacter ubique HTCC1062
264201 pcuCandidatus Protochlamydia amoebophila UWE25 (Parachlamydia sp.
413404 rmaCandidatus Ruthia magnifica Cm endosymbiont of Calyptogena
444179 smgCandidatus Sulcia muelleri GWSS
412965 vokCandidatus Vesicomyosocius okutanii HA endosymbiont of Calyptogena
9615 cfaCanis familiaris (dog)
4072 ecanCapsicum annuum (chile pepper) (EST)
246194 chyCarboxydothermus hydrogenoformans Z-2901
190650 ccrCaulobacter crescentus CB15
366602 cakCaulobacter sp. K31
243161 cmuChlamydia muridarum Nigg (Chlamydia trachomatis MoPn)
471472 ctbChlamydia trachomatis 434/Bu
315277 ctaChlamydia trachomatis A/HAR-13 (serovar A)
272561 ctrChlamydia trachomatis D/UW-3/CX (serovar D)
471473 ctlChlamydia trachomatis L2b/UCH-1/proctitis
3055 creChlamydomonas reinhardtii
218497 cabChlamydophila abortus S26/3
227941 ccaChlamydophila caviae GPIC
264202 cfeChlamydophila felis Fe/C-56
115711 cpaChlamydophila pneumoniae AR39
115713 cpnChlamydophila pneumoniae CWL029
138677 cpjChlamydophila pneumoniae J138
182082 cptChlamydophila pneumoniae TW-183
194439 cteChlorobaculum tepidum TLS
340177 cchChlorobium chlorochromatii CaD3
331678 cpbChlorobium phaeobacteroides BS1
290317 cphChlorobium phaeobacteroides DSM 266
324602 cauChloroflexus aurantiacus J-10-fl
243365 cviChromobacterium violaceum ATCC 12472
290398 csaChromohalobacter salexigens DSM 3043
7719 dcinCiona intestinalis (sea squirt) draft genome
51511 ecsvCiona savignyi (sea squirt) EST contigs
290338 ckoCitrobacter koseri ATCC BAA-895
2711 ecsiCitrus sinensis (Valencia orange) EST contigs
443906 cmiClavibacter michiganensis subsp. michiganensis NCPPB 382
31964 cmsClavibacter michiganensis subsp. sepedonicus
272562 cacClostridium acetobutylicum ATCC 824
290402 cbeClostridium beijerinckii NCIMB 8052
441770 cbaClostridium botulinum A ATCC 19397
413999 cboClostridium botulinum A ATCC 3502
441771 cbhClostridium botulinum A Hall
498214 cblClostridium botulinum A3 Loch Maree
508765 cbkClostridium botulinum B Eklund 17B
498213 cbbClostridium botulinum B1 Okra
441772 cbfClostridium botulinum F Langeland
272563 cdfClostridium difficile 630
431943 cklClostridium kluyveri DSM 555
386415 cnoClostridium novyi NT
195102 cpeClostridium perfringens 13
195103 cpfClostridium perfringens ATCC 13124
289380 cprClostridium perfringens SM101
357809 cpyClostridium phytofermentans ISDg
212717 ctcClostridium tetani E88
203119 cthClostridium thermocellum ATCC 27405
167879 cpsColwellia psychrerythraea 34H
257309 cdiCorynebacterium diphtheriae gravis NCTC13129
196164 cefCorynebacterium efficiens YS-314
196627 cgbCorynebacterium glutamicum ATCC 13032 (Bielefeld)
340322 cgtCorynebacterium glutamicum R
306537 cjkCorynebacterium jeikeium K411
504474 curCorynebacterium urealyticum DSM 7109
434922 cbdCoxiella burnetii Dugway 5J108-111
360115 cbsCoxiella burnetii RSA 331
227377 cbuCoxiella burnetii RSA 493
283643 cnbCryptococcus neoformans B-3501A
214684 cneCryptococcus neoformans JEC21 (Filobasidiella neoformans JEC21)
353151 choCryptosporidium hominis TU502
353152 cpvCryptosporidium parvum Iowa II
164546 ctiCupriavidus taiwanensis
45157 cmeCyanidioschyzon merolae 10D
321327 cyaCyanobacteria bacterium Yellowstone A-Prime (Synechococcus sp. JA-
321332 cybCyanobacteria bacterium Yellowstone B-Prime (Synechococcus sp. JA-
43989 cytCyanothece sp. ATCC 51142
269798 chuCytophaga hutchinsonii ATCC 33406
7955 dreDanio rerio (zebrafish)
284592 dhaDebaryomyces hansenii CBS767
159087 darDechloromonas aromatica RCB
243164 detDehalococcoides ethenogenes 195
216389 debDehalococcoides sp. BAV1
255470 dehDehalococcoides sp. CBDB1
319795 dgeDeinococcus geothermalis DSM 11300
243230 draDeinococcus radiodurans R1
398578 dacDelftia acidovorans SPH-1
138119 dsyDesulfitobacterium hafniense Y51
177439 dpsDesulfotalea psychrophila LSv54
349161 drmDesulfotomaculum reducens MI-1
207559 ddeDesulfovibrio desulfuricans G20
391774 dvlDesulfovibrio vulgaris subsp. vulgaris DP4
882 dvuDesulfovibrio vulgaris subsp. vulgaris Hildenborough
246195 dnoDichelobacter nodosus VCS1703A
352472 ddiDictyostelium discoideum
398580 dshDinoroseobacter shibae DFL 12
7217 ddanDrosophila ananassae
7220 dderDrosophila erecta
7222 ddgrDrosophila grimshawi
7227 dmeDrosophila melanogaster (fruit fly)
7230 ddmoDrosophila mojavensis
7234 ddpeDrosophila persimilis
7237 dpoDrosophila pseudoobscura
7238 ddseDrosophila sechellia
7240 ddsiDrosophila simulans
7244 ddviDrosophila virilis
7260 ddwiDrosophila willistoni
7245 ddyaDrosophila yakuba
269484 ecnEhrlichia canis Jake
205920 echEhrlichia chaffeensis Arkansas
302409 ergEhrlichia ruminantium Gardel
254945 erwEhrlichia ruminantium Welgevonden (France)
284813 ecuEncephalitozoon cuniculi GB-M1
294381 ehiEntamoeba histolytica
290339 esaEnterobacter sakazakii ATCC BAA-894
399742 entEnterobacter sp. 638
226185 efaEnterococcus faecalis V583 vancomycin-resistant clinical isolate
9796 decbEquus caballus (horse)
218491 ecaErwinia carotovora subsp. atroseptica SCRI1043
338565 etaErwinia tasmaniensis
314225 eliErythrobacter litoralis HTCC2594
362663 ecpEscherichia coli 536 (UPEC)
405955 ecvEscherichia coli APEC O1 (avian pathogenic Escherichia coli)
481805 eclEscherichia coli ATCC 8739
199310 eccEscherichia coli CFT073 (UPEC)
331111 ecwEscherichia coli E24377A
331112 ecxEscherichia coli HS
316385 ecdEscherichia coli K-12 DH10B
562 ecoEscherichia coli K-12 MG1655
316407 ecjEscherichia coli K-12 W3110
155864 eceEscherichia coli O157:H7 EDL933 (EHEC)
386585 ecsEscherichia coli O157:H7 Sakai (EHEC)
439855 ecmEscherichia coli SECEC SMS-3-5
364106 eciEscherichia coli UTI89 (UPEC)
3993 eeesEuphorbia esula (spurge) (EST)
262543 esiExiguobacterium sibiricum 255-15
381764 fnoFervidobacterium nodosum Rt17-B1
4606 efarFestuca arundinacea (tall fescue) (EST)
334413 fmaFinegoldia magna ATCC 29328
376686 fjoFlavobacterium johnsoniae UW101
402612 fpsFlavobacterium psychrophilum JIP02/86
484022 fphFrancisella philomiragia subsp. philomiragia ATCC 25017
458234 ftaFrancisella tularensis subsp. holarctica FTNF002-00
119857 ftlFrancisella tularensis subsp. holarctica LVS (Live Vaccine Strain)
393011 fthFrancisella tularensis subsp. holarctica OSU18
441952 ftmFrancisella tularensis subsp. mediasiatica FSC147
401614 ftnFrancisella tularensis subsp. novicida U112
393115 ftfFrancisella tularensis subsp. tularensis FSC 198
177416 ftuFrancisella tularensis subsp. tularensis Schu 4
418136 ftwFrancisella tularensis subsp. tularensis WY96-3418
326424 falFrankia alni ACN14a
106370 fraFrankia sp. CcI3
298653 freFrankia sp. EAN1pec
31033 dfruFugu rubripes (torafugu) draft genome
229533 fgrFusarium graminearum (Gibberella zeae PH-1)
190304 fnuFusobacterium nucleatum ATCC 25586
9031 ggaGallus gallus (chicken)
235909 gkaGeobacillus kaustophilus HTA426
420246 gtnGeobacillus thermodenitrificans NG80-2
398767 gloGeobacter lovleyi SZ
269799 gmeGeobacter metallireducens GS-15
243231 gsuGeobacter sulfurreducens PCA
351605 gurGeobacter uraniumreducens Rf4
184922 glaGiardia lamblia ATCC 50803
251221 gviGloeobacter violaceus PCC7421
272568 gdiGluconacetobacter diazotrophicus PAl 5
290633 goxGluconobacter oxydans 621H
3847 egmaGlycine max (soybean) EST contigs
29729 egarGossypium arboreum (tree cotton) EST contigs
3635 eghiGossypium hirsutum (upland cotton) (EST)
29730 egraGossypium raimondii EST contigs
411154 gfoGramella forsetii KT0803
391165 gbeGranulobacter bethesdensis CGDNIH1
233412 hduHaemophilus ducreyi 35000HP
281310 hitHaemophilus influenzae 86-028NP (nontypeable)
374930 hipHaemophilus influenzae PittEE
374931 hiqHaemophilus influenzae PittGG
71421 hinHaemophilus influenzae Rd KW20 (serotype d)
205914 hsoHaemophilus somnus (Histophilus somni) 129PT
228400 hsmHaemophilus somnus 2336
349521 hchHahella chejuensis KCTC 2396
272569 hmaHaloarcula marismortui ATCC 43049
64091 halHalobacterium salinarium NRC-1
478009 hslHalobacterium salinarum R1
362976 hwaHaloquadratum walsbyi DSM 16790 (HBSQ001)
349124 hhaHalorhodospira halophila SL1
4232 ehanHelianthus annuus (common sunflower) EST contigs
382638 hacHelicobacter acinonychis Sheeba
235279 hheHelicobacter hepaticus ATCC 51449
85962 hpyHelicobacter pylori 26695
357544 hpaHelicobacter pylori HPAG1
85963 hpjHelicobacter pylori J99
498761 hmoHeliobacterium modesticaldum Ice1
204773 harHerminiimonas arsenicoxydans
316274 hauHerpetosiphon aurantiacus ATCC 23779
9606 hsaHomo sapiens (human)
4513 ehvuHordeum vulgare (barley) EST contigs
415426 hbuHyperthermus butylicus DSM 5456
228405 hneHyphomonas neptunium ATCC 15444
283942 iloIdiomarina loihiensis L2TR
453591 ihoIgnicoccus hospitalis KIN4/I
35883 einiIpomoea nil (Japanese morning glory) (EST)
290400 janJannaschia sp. CCS1
266940 kraKineococcus radiotolerans SRS30216
272620 kpnKlebsiella pneumoniae subsp. pneumoniae MGH 78578
284590 klaKluyveromyces lactis NRRL Y-1140
262981 dkwaKluyveromyces waltii NCYC 2644 draft genome
378753 krhKocuria rhizophila DC2201
486041 lbcLaccaria bicolor S238N-H82
272621 lacLactobacillus acidophilus NCFM
387344 lbrLactobacillus brevis ATCC 367
321967 lcaLactobacillus casei ATCC 334
390333 ldbLactobacillus delbrueckii subsp. bulgaricus ATCC 11842
321956 lbuLactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
334390 lfeLactobacillus fermentum IFO 3956
324831 lgaLactobacillus gasseri ATCC 33323
405566 lheLactobacillus helveticus DPC 4571
257314 ljoLactobacillus johnsonii NCC 533
220668 lplLactobacillus plantarum WCFS1
299033 lreLactobacillus reuteri F275
314315 lsaLactobacillus sakei 23K
362948 lslLactobacillus salivarius subsp. salivarius UCC118
416870 llmLactococcus lactis subsp. cremoris MG1363
272622 llcLactococcus lactis subsp. cremoris SK11
272623 llaLactococcus lactis subsp. lactis IL1403
43195 elpeLactuca perennis (blue lettuce) (EST)
75948 elsiLactuca saligna (willowleaf lettuce) (EST)
4236 elstLactuca sativa (lettuce) (EST)
75947 elviLactuca virosa (wild lettuce) (EST)
363253 lipLawsonia intracellularis PHE/MN1-00
400673 lpcLegionella pneumophila Corby
297245 lpfLegionella pneumophila Lens
297246 lppLegionella pneumophila Paris
272624 lpnLegionella pneumophila subsp. pneumophila Philadelphia 1
281090 lxxLeifsonia xyli subsp. xyli CTCB07
347515 lmaLeishmania major Friedlin
355278 lbfLeptospira biflexa serovar Patoc Patoc 1 (Ames)
456481 lbiLeptospira biflexa serovar Patoc Patoc 1 (Paris)
355277 lbjLeptospira borgpetersenii serovar Hardjo-bovis JB197
355276 lblLeptospira borgpetersenii serovar Hardjo-bovis L550
267671 licLeptospira interrogans serovar Copenhageni Fiocruz L1-130
189518 lilLeptospira interrogans serovar Lai 56601
395495 lchLeptothrix cholodnii SP-6
349519 lciLeuconostoc citreum KM20
203120 lmeLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293
272626 linListeria innocua CLIP 11262 (serotype 6a)
169963 lmoListeria monocytogenes EGD-e (serotype 1/2a)
265669 lmfListeria monocytogenes F2365 (serotype 4b)
386043 lweListeria welshimeri SLCC5334 (serotype 6b)
34305 eljaLotus japonicus (lotus) (EST)
444177 lspLysinibacillus sphaericus C3-41
9544 mccMacaca mulatta (rhesus monkey)
242507 mgrMagnaporthe grisea 70-15
156889 mgmMagnetococcus sp. MC-1
342108 magMagnetospirillum magneticum AMB-1
425265 mglMalassezia globosa CBS 7966
3983 emecManihot esculent (tapioca) (EST)
221988 msuMannheimia succiniciproducens MBEL55E
394221 mmrMaricaulis maris MCS10
351348 maqMarinobacter aquaeolei VT8
400668 mmwMarinomonas sp. MWYL1
3880 emtrMedicago truncatula (barrel medic) EST contigs
265311 mflMesoplasma florum L1
266835 mloMesorhizobium loti MAFF303099
266779 mesMesorhizobium sp. BNC1
399549 mseMetallosphaera sedula DSM 5348
187420 mthMethanobacterium thermoautotrophicum deltaH
420247 msiMethanobrevibacter smithii ATCC 35061
259564 mbuMethanococcoides burtonii DSM 6242
419665 maeMethanococcus aeolicus Nankai-3
243232 mjaMethanococcus jannaschii DSM 2661 (Methanocaldococcus jannaschii
402880 mmqMethanococcus maripaludis C5
444158 mmxMethanococcus maripaludis C6
426368 mmzMethanococcus maripaludis C7
267377 mmpMethanococcus maripaludis S2
406327 mvnMethanococcus vannielii SB
410358 mlaMethanocorpusculum labreanum Z
368407 memMethanoculleus marisnigri JR1
190192 mkaMethanopyrus kandleri AV19
349307 mtpMethanosaeta thermophila PT
188937 macMethanosarcina acetivorans C2A
269797 mbaMethanosarcina barkeri fusaro chromosome 1
192952 mmaMethanosarcina mazei Goe1
339860 mstMethanosphaera stadtmanae DSM 3091
323259 mhuMethanospirillum hungatei JF-1
420662 mptMethylibium petroleiphilum PM1
265072 mfaMethylobacillus flagellatus KT
419610 mexMethylobacterium extorquens PA1
426355 mrdMethylobacterium radiotolerans JCM 2831
426117 metMethylobacterium sp. 4-46
243233 mcaMethylococcus capsulatus Bath
449447 marMicrocystis aeruginosa NIES-843
375286 mmsMinibacterium massiliensis (Janthinobacterium sp. Marseille)
30286 emteMolgula tectiformis EST contigs
13616 mdoMonodelphis domestica (opossum)
431895 mbrMonosiga brevicollis MX1
264732 mtaMoorella thermoacetica ATCC 39073
10090 mmuMus musculus (house mouse)
36809 mabMycobacterium abscessus
243243 mavMycobacterium avium 104
262316 mpaMycobacterium avium subsp. paratuberculosis k10
410289 mbbMycobacterium bovis BCG Pasteur 1173P2
233413 mboMycobacterium bovis subsp. bovis AF2122/97
350054 mgiMycobacterium gilvum PYR-GCK (Mycobacterium flavescens PYR-GCK)
272631 mleMycobacterium leprae TN
216594 mmiMycobacterium marinum M
246196 msmMycobacterium smegmatis MC2 155
164757 mjlMycobacterium sp. JLS
189918 mkmMycobacterium sp. KMS
164756 mmcMycobacterium sp. MCS
83331 mtcMycobacterium tuberculosis CDC1551 clinical strain
336982 mtfMycobacterium tuberculosis F11
419947 mraMycobacterium tuberculosis H37Ra
83332 mtuMycobacterium tuberculosis H37Rv laboratory strain
362242 mulMycobacterium ulcerans Agy99
350058 mvaMycobacterium vanbaalenii PYR-1
347257 maaMycoplasma agalactiae PG2
340047 mcpMycoplasma capricolum subsp. capricolum ATCC 27343
233150 mgaMycoplasma gallisepticum R
243273 mgeMycoplasma genitalium G-37
295358 mhyMycoplasma hyopneumoniae 232
262722 mhpMycoplasma hyopneumoniae 7448
262719 mhjMycoplasma hyopneumoniae J
267748 mmoMycoplasma mobile 163K
272632 mmyMycoplasma mycoides subsp. mycoides SC PG1
272633 mpeMycoplasma penetrans HF-2
272634 mpnMycoplasma pneumoniae M129
272635 mpuMycoplasma pulmonis UAB CTIP
262723 msyMycoplasma synoviae 53
246197 mxaMyxococcus xanthus DK 1622
228908 neqNanoarchaeum equitans Kin4-M
348780 nphNatronomonas pharaonis DSM 2160
242231 ngoNeisseria gonorrhoeae FA 1090
374833 nmnNeisseria meningitidis 053442
272831 nmcNeisseria meningitidis FAM18 (serogroup C)
122586 nmeNeisseria meningitidis MC58 (serogroup B)
122587 nmaNeisseria meningitidis Z2491 (serogroup A)
45351 nveNematostella vectensis (sea anemone)
222891 nseNeorickettsia sennetsu Miyayama
367110 ncrNeurospora crassa N150
4100 enbeNicotiana benthamiana (EST)
4097 entaNicotiana tabacum (tabacco) (EST)
387092 nisNitratiruptor sp. SB155-2
323097 nhaNitrobacter hamburgensis X14
323098 nwiNitrobacter winogradskyi Nb-255
323261 nocNitrosococcus oceani ATCC 19707
228410 neuNitrosomonas europaea ATCC 19718
335283 netNitrosomonas eutropha C71
436308 nmrNitrosopumilus maritimus SCM1
323848 nmuNitrosospira multiformis ATCC 25196
247156 nfaNocardia farcinica IFM 10152
196162 ncaNocardioides sp. JS614
63737 npuNostoc punctiforme PCC 73102
279238 narNovosphingobium aromaticivorans DSM 12444
221109 oihOceanobacillus iheyensis HTE831
439375 oanOchrobactrum anthropi ATCC 49188
203123 ooeOenococcus oeni PSU-1
262768 poyOnion yellows phytoplasma OY-M
452637 oteOpitutus terrae PB90-1
357244 otsOrientia tsutsugamushi Boryong
334380 ottOrientia tsutsugamushi Ikeda
9258 oaaOrnithorhynchus anatinus (platypus)
4530 eosaOryza sativa EST contigs
39946 eosiOryza sativa indica (Indian rice) (EST)
39947 osaOryza sativa ssp. japonica cultivar Nipponbare (Japanese rice)
8090 dolaOryzias latipes (Japanese medaka)
436017 oluOstreococcus lucimarinus CCE9901
70448 dotaOstreococcus tauri draft genome
9598 ptrPan troglodytes (chimpanzee)
435591 pdiParabacteroides distasonis ATCC 8503
318586 pdeParacoccus denitrificans PD1222
5888 dptmParamecium tetraurelia draft genome
402881 plaParvibaculum lavamentivorans DS-1
272843 pmuPasteurella multocida PM70
278197 ppePediococcus pentosaceus ATCC 25745
338963 pcaPelobacter carbinolicus DSM 2380
338966 ppdPelobacter propionicus DSM 2379
319225 pltPelodictyon luteolum DSM 273
370438 pthPelotomaculum thermopropionicum SI
403833 pmoPetrotoga mobilis SJ95
273507 dpchPhanerochaete chrysosporium draft genome
298386 pprPhotobacterium profundum SS9
243265 pluPhotorhabdus luminescens subsp. laumondii TTO1
3218 eppaPhyscomitrella patens EST contigs
145481 pppPhyscomitrella patens subsp. patens
3330 epglPicea glauca (white spruce) EST contigs
3332 epsiPicea sitchensis (sitka spruce) (EST)
322104 picPichia stipitis CBS 6054
263820 ptoPicrophilus torridus DSM 9790
71647 eppiPinus pinaster (maritime pine) (EST)
3352 eptaPinus taeda (loblolly pine) EST contigs
36329 pfaPlasmodium falciparum 3D7
5850 dpknPlasmodium knowlesi draft genome
352914 pyoPlasmodium yoelii yoelii 17XNL
515849 panPodospora anserina DSM 980
365044 pnaPolaromonas naphthalenivorans CJ2
296591 polPolaromonas sp. JS666
452638 pnePolynucleobacter necessarius STIR1
312153 pnuPolynucleobacter sp. QLW-P1DMWA-1
113636 eptpPopulus tremula (European aspen) EST contigs
3694 dpopPopulus trichocarpa draft genome
431947 pgnPorphyromonas gingivalis ATCC 33277
242619 pgiPorphyromonas gingivalis W83
146891 pmbProchlorococcus marinus AS9601
59919 pmmProchlorococcus marinus MED4 (subsp. pastoris str. CCMP1378)
167546 pmgProchlorococcus marinus MIT 9301
59922 pmfProchlorococcus marinus MIT 9303
74546 pmiProchlorococcus marinus MIT 9312
74547 pmtProchlorococcus marinus MIT 9313
167542 pmcProchlorococcus marinus MIT 9515
167555 pmeProchlorococcus marinus NATL1A
59920 pmnProchlorococcus marinus NATL2A
167539 pmaProchlorococcus marinus SS120 (subsp. marinus CCMP1375)
93059 pmjProchlorococcus marinus str. MIT 9211
93060 pmhProchlorococcus marinus str. MIT 9215
267747 pacPropionibacterium acnes KPA171202
290318 pviProsthecochloris vibrioformis DSM 265
3760 eppsPrunus persica (peach) (EST)
342610 patPseudoalteromonas atlantica T6c
326442 phaPseudoalteromonas haloplanktis TAC125
208964 paePseudomonas aeruginosa PA01
381754 papPseudomonas aeruginosa PA7
208963 pauPseudomonas aeruginosa UCBPP-PA14
384676 penPseudomonas entomophila L48
220664 pflPseudomonas fluorescens Pf-5
205922 pfoPseudomonas fluorescens PfO-1
399739 pmyPseudomonas mendocina ymp
351746 ppfPseudomonas putida F1
76869 ppgPseudomonas putida GB-1
160488 ppuPseudomonas putida KT2440
390235 ppwPseudomonas putida W619
379731 psaPseudomonas stutzeri A1501
264730 pspPseudomonas syringae pv. phaseolicola 1448A
205918 psbPseudomonas syringae pv. syringae B728a
223283 pstPseudomonas syringae pv. tomato DC3000
259536 parPsychrobacter arcticum 273-4
335284 pcrPsychrobacter cryohalolentis K5
349106 prwPsychrobacter sp. PRwf-1
357804 pinPsychromonas ingrahamii 37
178306 paiPyrobaculum aerophilum IM2
340102 pasPyrobaculum arsenaticum DSM 13514
410359 pclPyrobaculum calidifontis JCM 11548
384616 pisPyrobaculum islandicum DSM 4184
272844 pabPyrococcus abyssi GE5
186497 pfuPyrococcus furiosus DSM 3638
70601 phoPyrococcus horikoshii OT3
381666 rehRalstonia eutropha H16
264198 reuRalstonia eutropha JMP134
266264 rmeRalstonia metallidurans CH34
267608 rsoRalstonia solanacearum GMI1000
10116 rnoRattus norvegicus (Norway rat)
288705 rsaRenibacterium salmoninarum ATCC 33209
347834 retRhizobium etli CFN 42
216596 rleRhizobium leguminosarum bv. viciae 3841
272943 rspRhodobacter sphaeroides 2.4.1
349102 rsqRhodobacter sphaeroides ATCC 17025
349101 rshRhodobacter sphaeroides ATCC 17029
101510 rhaRhodococcus sp. RHA1
338969 rfrRhodoferax ferrireducens T118 (DSM 15236)
243090 rbaRhodopirellula baltica SH 1 (Pirellula sp. strain 1)
316055 rpeRhodopseudomonas palustris BisA53
316056 rpcRhodopseudomonas palustris BisB18
316057 rpdRhodopseudomonas palustris BisB5
258594 rpaRhodopseudomonas palustris CGA009
316058 rpbRhodopseudomonas palustris HaA2
269796 rruRhodospirillum rubrum ATCC 11170
293614 rakRickettsia akari Hartford
391896 rboRickettsia bellii OSU 85-389
336407 rbeRickettsia bellii RML369-C
293613 rcmRickettsia canadensis McKiel
272944 rcoRickettsia conorii Malish 7
315456 rfeRickettsia felis URRWXCal2
416276 rmsRickettsia massiliae MTU5
272947 rprRickettsia prowazekii Madrid E
452659 rrjRickettsia rickettsii Iowa
392021 rriRickettsia rickettsii 'Sheila Smith'
257363 rtyRickettsia typhi Wilmington (ATCC VR-144)
383372 rcaRoseiflexus castenholzii DSM 13941
357808 rrsRoseiflexus sp. RS-1
375451 rdeRoseobacter denitrificans OCh 114
266117 rxyRubrobacter xylanophilus DSM 9941
226127 dsbaSaccharomyces bayanus draft genome
4932 sceSaccharomyces cerevisiae S288C
226126 dsmiSaccharomyces mikatae draft genome
226125 dspdSaccharomyces paradoxus draft genome
203122 sdeSaccharophagus degradans 2-40
405948 senSaccharopolyspora erythraea NRRL 2338
4547 esofSaccharum officinarum (sugarcane) EST contigs
309807 sruSalinibacter ruber DSM 13855
391037 saqSalinispora arenicola CNS-205
369723 stpSalinispora tropica CNB-440
41514 sesSalmonella enterica subsp. arizonae serovar 62:z4z23:--
321314 secSalmonella enterica subsp. enterica serovar Choleraesuis
295319 sptSalmonella enterica subsp. enterica serovar Paratyphi A
272994 spqSalmonella enterica subsp. enterica serovar Paratyphi B
220341 stySalmonella enterica subsp. enterica serovar Typhi CT18 (Salmonella
209261 sttSalmonella enterica subsp. enterica serovar Typhi Ty2
99287 stmSalmonella typhimurium LT2
6182 esjaSchistosoma japonicum (fluke) EST contigs
4896 spoSchizosaccharomyces pombe
399741 speSerratia proteamaculans 568
326297 sazShewanella amazonensis SB2B
325240 sblShewanella baltica OS155
402882 sbmShewanella baltica OS185
399599 sbnShewanella baltica OS195
318161 sdnShewanella denitrificans OS217
318167 sfrShewanella frigidimarina NCIMB 400
458817 shlShewanella halifaxensis HAW-EB4
323850 sloShewanella loihica PV-4
211586 sonShewanella oneidensis MR-1
398579 splShewanella pealeana ATCC 700345
319224 spcShewanella putrefaciens CN-32
425104 sseShewanella sediminis HAW-EB3
94122 shnShewanella sp. ANA-3
60480 sheShewanella sp. MR-4
60481 shmShewanella sp. MR-7
351745 shwShewanella sp. W3-18-1
392500 swdShewanella woodyi ATCC 51908
344609 sbcShigella boydii CDC 3083-94
300268 sboShigella boydii Sb227
300267 sdyShigella dysenteriae Sd197
198215 sfxShigella flexneri 2457T (serotype 2a)
198214 sflShigella flexneri 301 (serotype 2a)
373384 sfvShigella flexneri 8401 (serotype 5b)
300269 ssnShigella sonnei Ss046
246200 silSilicibacter pomeroyi DSS-3
292414 sitSilicibacter sp. TM1040
366394 smdSinorhizobium medicae WSM419
266834 smeSinorhizobium meliloti 1021
343509 sglSodalis glossinidius morsitans endosymbiont of Glossina spp.
4081 eslySolanum lycopersicum (tomato) (EST)
4113 estuSolanum tuberosum (potato) EST contigs
234267 susSolibacter usitatus Ellin6076
448385 sclSorangium cellulosum 'So ce 56'
4558 esbiSorghum bicolor (sorghum) EST contigs
132711 esppSorghum propinquum (EST)
392499 swiSphingomonas wittichii RW1
317655 salSphingopyxis alaskensis RB2256
273036 sabStaphylococcus aureus RF122
93062 sacStaphylococcus aureus subsp. aureus COL
359787 sahStaphylococcus aureus subsp. aureus JH1
359786 sajStaphylococcus aureus subsp. aureus JH9
282458 sarStaphylococcus aureus subsp. aureus MRSA252 methicillin-resistant
282459 sasStaphylococcus aureus subsp. aureus MSSA476 methicillin-
418127 sawStaphylococcus aureus subsp. aureus Mu3
158878 savStaphylococcus aureus subsp. aureus Mu50 MRSA strain with
196620 samStaphylococcus aureus subsp. aureus MW2
158879 sauStaphylococcus aureus subsp. aureus N315 meticillin-resistant
93061 saoStaphylococcus aureus subsp. aureus NCTC 8325
426430 saeStaphylococcus aureus subsp. aureus Newman
367830 saaStaphylococcus aureus subsp. aureus USA300
451516 saxStaphylococcus aureus subsp. aureus USA300_TCH1516
176280 sepStaphylococcus epidermidis ATCC 12228
176279 serStaphylococcus epidermidis RP62A
279808 shaStaphylococcus haemolyticus JCSC1435
342451 sspStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305
399550 smrStaphylothermus marinus F1
208435 sagStreptococcus agalactiae 2603 (serotype V)
205921 sakStreptococcus agalactiae A909 (serotype Ia)
211110 sanStreptococcus agalactiae NEM316 (serotype III)
467705 sgoStreptococcus gordonii Challis
210007 smuStreptococcus mutans UA159 (serotype C)
516950 spwStreptococcus pneumoniae CGSP14
373153 spdStreptococcus pneumoniae D39
487214 spvStreptococcus pneumoniae Hungary19A-6
171101 sprStreptococcus pneumoniae R6
170187 spnStreptococcus pneumoniae TIGR4
160491 spfStreptococcus pyogenes Manfredo (serotype M5)
370552 sphStreptococcus pyogenes MGAS10270 (serotype M3)
286636 spaStreptococcus pyogenes MGAS10394 (serotype M6)
370554 spiStreptococcus pyogenes MGAS10750 (serotype M3)
370553 spjStreptococcus pyogenes MGAS2096 (serotype M3)
198466 spgStreptococcus pyogenes MGAS315 (serotype M3)
293653 spzStreptococcus pyogenes MGAS5005 (serotype M1)
319701 spbStreptococcus pyogenes MGAS6180 (serotype M28)
186103 spmStreptococcus pyogenes MGAS8232 (serotype M18)
370551 spkStreptococcus pyogenes MGAS9429 (serotype M3)
160490 spyStreptococcus pyogenes SF370 (serotype M1)
193567 spsStreptococcus pyogenes SSI-1 (serotype M3)
388919 ssaStreptococcus sanguinis SK36
391295 ssuStreptococcus suis 05ZYH33
391296 ssvStreptococcus suis 98HAH33
299768 stcStreptococcus thermophilus CNRZ1066
322159 steStreptococcus thermophilus LMD-9
264199 stlStreptococcus thermophilus LMG18311
227882 smaStreptomyces avermitilis MA-4680
100226 scoStreptomyces coelicolor A3(2)
455632 sgrStreptomyces griseus subsp. griseus NBRC 13350
7668 spuStrongylocentrotus purpuratus (purple sea urchin)
330779 saiSulfolobus acidocaldarius DSM 639
273057 ssoSulfolobus solfataricus P2
273063 stoSulfolobus tokodaii strain7
436114 sulSulfurihydrogenibium sp. YO3AOP1
387093 sunSulfurovum sp. NBC37-1
9823 sscSus scrofa (pig)
292459 sthSymbiobacterium thermophilum IAM14863
1140 syfSynechococcus elongatus PCC 7942
269084 sycSynechococcus elongatus PCC6301
64471 sygSynechococcus sp. CC9311
110662 sydSynechococcus sp. CC9605
316279 syeSynechococcus sp. CC9902
32049 sypSynechococcus sp. PCC 7002
316278 syrSynechococcus sp. RCC307
32051 syxSynechococcus sp. WH 7803
84588 sywSynechococcus sp. WH 8102
1148 synSynechocystis sp. PCC 6803
335543 sfuSyntrophobacter fumaroxidans MPOB
335541 swoSyntrophomonas wolfei subsp. wolfei str. Goettingen
56780 satSyntrophus aciditrophicus SB
312017 tetTetrahymena thermophila SB210 macronuclear genome
99883 dtniTetraodon nigroviridis draft genome
296543 dtpsThalassiosira pseudonana draft genome
353154 tanTheileria annulata Ankara
333668 tpvTheileria parva Muguga
340099 tpdThermoanaerobacter pseudethanolicus ATCC 33223
399726 texThermoanaerobacter sp. X514
273068 tteThermoanaerobacter tengcongensis MB4(T)
269800 tfuThermobifida fusca YX
69014 tkoThermococcus kodakaraensis KOD1
368408 tpeThermofilum pendens Hrk 5
273075 tacThermoplasma acidophilum DSM 1728
273116 tvoThermoplasma volcanium GSS1
444157 tneThermoproteus neutrophilus V24Sta
391009 tmeThermosipho melanesiensis BI429
197221 telThermosynechococcus elongatus BP-1
416591 tleThermotoga lettingae TMO
243274 tmaThermotoga maritima MSB8
390874 tptThermotoga petrophila RKU-1
126740 trqThermotoga sp. RQ2
262724 tthThermus thermophilus HB27
300852 ttjThermus thermophilus HB8
292415 tbdThiobacillus denitrificans ATCC 25259
317025 tcxThiomicrospira crunogena XCL-2
326298 tdnThiomicrospira denitrificans ATCC 33889
243275 tdeTreponema denticola ATCC 35405
243276 tpaTreponema pallidum subsp. pallidum Nichols
455434 tppTreponema pallidum subsp. pallidum SS14
7070 tcaTribolium castaneum (red flour beetle)
203124 terTrichodesmium erythraeum IMS101
412133 tvaTrichomonas vaginalis G3
4565 etaeTriticum aestivum (bread wheat) EST contigs
218496 twsTropheryma whipplei TW08/27
203267 twhTropheryma whipplei Twist
185431 tbrTrypanosoma brucei TREU927
353153 tcrTrypanosoma cruzi CL Brener
351160 rciUncultured methanogenic archaeon RC-I (Rice Cluster I)
505682 upaUreaplasma parvum serovar 3 ATCC 27815
273119 uurUreaplasma urealyticum ATCC 700970 (serovar 3)
237631 umaUstilago maydis 521
436907 vpoVanderwaltozyma polyspora DSM 70294
391735 veiVerminephrobacter eiseniae EF01-2
243277 vchVibrio cholerae El Tor N16961 (biovar eltor)
345073 vcoVibrio cholerae O395
312309 vfiVibrio fischeri ES114
338187 vhaVibrio harveyi ATCC BAA-1116
223926 vpaVibrio parahaemolyticus RIMD 2210633
216895 vvuVibrio vulnificus CMCP6
196600 vvyVibrio vulnificus YJ016
29760 dvviVitis vinifera (wine grape)
36870 wbrWigglesworthia glossinidia (Wigglesworthia brevipalpis)
163164 wolWolbachia sp. wMel endosymbiont of Drosophila melanogaster (fruit
292805 wbmWolbachia wBm endosymbiont of Brugia malayi TRS
273121 wsuWolinella succinogenes DSM 1740
78245 xauXanthobacter autotrophicus Py2
190486 xacXanthomonas axonopodis pv. citri 306
314565 xcbXanthomonas campestris pv. campestris 8004 (Beijing)
190485 xccXanthomonas campestris pv. campestris ATCC 33913
316273 xcvXanthomonas campestris pv. vesicatoria 85-10
291331 xooXanthomonas oryzae pv. oryzae KACC10331
342109 xomXanthomonas oryzae pv. oryzae MAFF 311018
8355 xlaXenopus laevis (African clawed frog)
8364 xtrXenopus tropicalis (western clawed frog)
160492 xfaXylella fastidiosa 9a5c
405440 xfmXylella fastidiosa M12
405441 xfnXylella fastidiosa M23
183190 xftXylella fastidiosa Temecula1
284591 yliYarrowia lipolytica CLIB122
393305 yenYersinia enterocolitica subsp. enterocolitica 8081
349746 ypgYersinia pestis Angola
360102 ypaYersinia pestis Antiqua
229193 ypmYersinia pestis biovar Mediaevails 91001
214092 ypeYersinia pestis CO92
187410 ypkYersinia pestis KIM
377628 ypnYersinia pestis Nepal516
386656 yppYersinia pestis Pestoides F
349747 ypiYersinia pseudotuberculosis IP 31758
273123 ypsYersinia pseudotuberculosis IP32953
502800 ypyYersinia pseudotuberculosis YPIII
4577 ezmaZea mays (maize) EST contigs
34245 ezelZinnia elegans (zinnia) (EST)
264203 zmoZymomonas mobilis subsp. mobilis ZM4